If its a 12V Fan you could use a molex connector (The ones you use to power your HD, CD-ROM and alike, Yellow and Back wire=12V).
If you want it to look good, use a PCI slot backplate(?) drill a hole for a plug (the ones used on amplifiers) in the backplate, solder a male plug to the FAN, put a female plug in the Backplate (use a grommet!!!, you don't wanna short circuit something) and to be safe solder the positive lead to the middle of the plug(s).
If you don't understand what I'm trying to tell you, just ask and I'll do some painting.