Hey mumrah,
Here is my experience with the Via Aqua 1300, your mileage may vary:
I did the Via Aqua 1300 impeller mod about 3 months ago and my 1300 is still virtually silent. The "new" noise and vibration you are experiencing may be a startup issue that is not uncommon after the mod.
The stock impeller on the Via 1300 allows about 1/4 inch of free rotation on the shaft in either direction before the impeller actually gets moving. This slight free rotation allows the pump to get moving before encountering the resistance of the water with the impleller blades. This "slop" in the mechanism also causes a lot of the vibration and pump noise in the stock Via 1300.
This mod is intended to glue the impeller into a fixed position eliminating the free rotation as well as vibration and noise. Unfortunately, in doing so it also removes the slop in the mechanism that assisted in the pump's start up.
My Via needs from 10-20 seconds to get going now, and it sits there rumbling while it tries to come to life. I leave my PC running 24/7, so I don't have to stop/start my Via unless I am doing maintenance or there is a power outage at my house.
I haven't had any trouble with my Via outside of this startup issue.
Good luck!!