Alright, now the computer won't even start for some reason. When I removed the other graphics card and put the other one in to test. The tower would go on for about two seconds, then just turn off again. Sometimes I would get beep until it just turned off and sometimes I wouldn't.
I tried reseting CMOS and I'm still having the same problem. The tower will turn on for about two seconds, then turn off again. Also had the interesting issue that when I put my computer into sleep or standby, the motherboard, gpu, cpu, etc., would turn off, but the tower would still be on and running. The fans, etc.
Any ideas on what the new problem could be?